BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027B12SP1|AL428682
(838 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1775 1380 0.0
>3x_Contig1775
Length = 26320
Score = 1380 bits (685), Expect = 0.0
Identities = 789/833 (94%), Gaps = 1/833 (0%)
Strand = Plus / Minus
Query: 6 atgaaagacatcaaaataaagaaacggaaacwaaattgtataacaaacttgaccgcagah 65
||||| |||||||||| || || |||||||| |||| |||| |||| ||||||||||||
Sbjct: 23983 atgaaggacatcaaaagaaggagacggaaacgaaatggtatgacaagcttgaccgcagag 23924
Query: 66 aacaattcttactccatcgcaacawaatcttaacaatacgtacraagaaattaaatgatt 125
|||||||||||| ||||||||||| ||||||||||| |||||| ||||||||||| ||||
Sbjct: 23923 aacaattcttacgccatcgcaacagaatcttaacaagacgtacgaagaaattaaaggatt 23864
Query: 126 acctatkgtctttactatgggaaaaatttgataaawattttagacaagakagactaaaga 185
|||||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||||||
Sbjct: 23863 acctatggtctttactatgggaaaagtttgataaagattttagacaagagagactaaaga 23804
Query: 186 kgaaaaacatggatgacacaataaatataratggcragcagtttctacaaaaagtcgact 245
|||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||||
Sbjct: 23803 ggaaaaacatggatgacacaatagatatagatggcgagcagtttctacaagaagtcgact 23744
Query: 246 catatgtkcttkggtatggtagaagttttaaacaatggattattccagtcgacgaaagtt 305
||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23743 catatgtgcttgggtatggtagaagttttaaacaatggattattccagtcgacgaaagtg 23684
Query: 306 cgtatagttacaaahacgtggagacattaragttaccagcagacgtttgtatcacacaac 365
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 23683 cgtatagttacaaagacgtggagacattagagttaccagcagacgtttgtatcacacaac 23624
Query: 366 aggatctttacagtctgtccaaatttggtattccaacgaacaactatcaagtcgattctc 425
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23623 aggatcttgacagtctgtccaaatttggtattccaacgaacaactatcaagtcgattctc 23564
Query: 426 aggattkgtatttggatttchagabtggaaaacacggtattaacgatttcwagaaagtta 485
|||||| ||||||||||| | ||| ||||||||||||||||||||||||| ||||||| |
Sbjct: 23563 aggattggtatttggattgcaagagtggaaaacacggtattaacgatttcaagaaagtga 23504
Query: 486 aggaccaaaatatagtatgttgtgaaaawagccatatattgkaacttttggaggagcagg 545
|||||||||| ||||||||||||||||| |||||||||| | |||||| |||||||||||
Sbjct: 23503 aggaccaaaagatagtatgttgtgaaaaaagccatatatgggaactttgggaggagcagg 23444
Query: 546 acccatcattaatagccatcctttcacatggacatgaccacatgttaacacccagagaac 605
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23443 acccatcagtaatagccatcctttcacatggacatgaccacatgttaacacccagagaac 23384
Query: 606 ttggaggggtaacgatgtatgacgagaaccttcgtagaagatcttcgataagggacgaat 665
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 23383 ttggaggggtaacgatgtatgacgagaaccttcgtagaagatcttcgagaagggacgaat 23324
Query: 666 cggttaacggcaaggcatcttacatcgagaataggcctacggagaggaaacctttcgatg 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23323 cggttaacggcaaggcatcttacatcgagaataggcctacggagaggaaacctttcgatg 23264
Query: 726 tcatggaaccctttatctcgtcaagatgtttacatgagatggaatctgaactaagacaaa 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23263 tcatggaaccctttatctcgtcaagatgtttacatgagatggaatctgaactaagacaaa 23204
Query: 786 attttgctgccgatgtgaaactaaataagaaccaatgaaagawagaaggcaga 838
|||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 23203 attttgctgccgatgtgaaact-aataagaaccaatgaaagaaagaaggcaga 23152
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4432
Number of Sequences: 1807
Number of extensions: 4432
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 838
length of database: 10,358,551
effective HSP length: 16
effective length of query: 822
effective length of database: 10,329,639
effective search space: 8490963258
effective search space used: 8490963258
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.3 bits)